PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975152.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 374aa MW: 41100.3 Da PI: 5.0062 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 51 | 2.6e-16 | 172 | 218 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq XP_024975152.1 172 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 218 6*************************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 374 aa Download sequence |
MMNHIVPDFE ADEDYLIPEM PKKSTMGGDE DIMELLWQNG QVVMQSQNQR SVGNKKPEIR 60 TSMANREIRS SVVEEETGPS DLFMQEDEMS SWLHYPMDEN SLEGCLYSGS GASASVEPSS 120 QKPPPTTDDR KRKGRDTDDT ECHSEDVEFE YTDAKKQSHG ATSTKRSRAA EVHNLSERRR 180 RDRINEKMKA LQELIPRCNK SDKASMLDEA IEYLKSLQMQ VQMMSMGCSM VPMMFPGVQQ 240 YMSPMAMGMG MNHAMVPYPS ILPGSSLPNP AAAVAAAAAT QLGPRFPVPG FNMPPPVTIT 300 GGPAASQAAN LSAPMMSSFP SHNQNQPQAP NFSDPFQQYL GLHPTQIPLP QNQGGMPPIA 360 TKPSSSKDPT NQSG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 177 | 182 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20180.1 | 7e-48 | bHLH family protein |