PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024975152.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 374aa    MW: 41100.3 Da    PI: 5.0062
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024975152.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH512.6e-16172218455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      hn  ErrRRdriN+++  L+el+P +      K +Ka++L +A+eY+ksLq
  XP_024975152.1 172 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 218
                     6*************************8.....6******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MMNHIVPDFE ADEDYLIPEM PKKSTMGGDE DIMELLWQNG QVVMQSQNQR SVGNKKPEIR  60
TSMANREIRS SVVEEETGPS DLFMQEDEMS SWLHYPMDEN SLEGCLYSGS GASASVEPSS  120
QKPPPTTDDR KRKGRDTDDT ECHSEDVEFE YTDAKKQSHG ATSTKRSRAA EVHNLSERRR  180
RDRINEKMKA LQELIPRCNK SDKASMLDEA IEYLKSLQMQ VQMMSMGCSM VPMMFPGVQQ  240
YMSPMAMGMG MNHAMVPYPS ILPGSSLPNP AAAVAAAAAT QLGPRFPVPG FNMPPPVTIT  300
GGPAASQAAN LSAPMMSSFP SHNQNQPQAP NFSDPFQQYL GLHPTQIPLP QNQGGMPPIA  360
TKPSSSKDPT NQSG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177182ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.17e-48bHLH family protein