PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975146.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | G2-like | ||||||||
Protein Properties | Length: 287aa MW: 31560.2 Da PI: 7.2468 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 96.8 | 1.6e-30 | 93 | 146 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl XP_024975146.1 93 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 146 59*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 48.3 | 2.4e-15 | 95 | 145 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vdav+ lG + +ktI++ m g+t++++ s++qky+ XP_024975146.1 95 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 145 789*******************9***************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MREDDSNWFS KWEQELPSPE DLMPITQTLI TPDLAIAFDI RSPHTHHPPS LHHHQQQPPP 60 ISTPSSQPNS GEFDSPELGG GGAGDEPART LKRPRLVWTP QLHKRFVDAV AHLGIKNAVP 120 KTIMQLMSVD GLTRENVASH LQKYRLYLKR MQGLSSGSGG NGSGGDPATD HLFASSPVPA 180 HFLHQGRPNS EHYLPYVPVA ALQQQQQMAA AAAAGHHPQL QPRYGHVGHF GSPRNGQFEH 240 PFLNRQSQQP IHRVGTPIHN SVPSSYVDDL ESANGRKVLT LFPTGDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10760.1 | 5e-91 | G2-like family protein |