PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024975117.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Protein Properties

Length: 154aa MW: 17619.1 Da PI: 9.6886

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024975117.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	39.9	7.7e-13	18	103	9	99
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +v+k++ l++p++f++ h ++ +++l ++ ++W++ + ++g+ + +kGW eF++ ++ g ++Fk++g+s f +v++f++ XP_024975117.1 18 SVNKTS-LRIPNRFIRGHRKQI-LLNDVILIVSDDKVWQLGW-MISGDGKLWVQKGWPEFANHYRIGYGHLLLFKHMGKSMF--HVTIFDS 103 555555.*********7664.5679***********.45666779**********************98888..**997 PP

Sequence ? help Back to Top
Protein Sequence Length: 154 aa Download sequence
MPSHRKPTNF YTAILSGSVN KTSLRIPNRF IRGHRKQILL NDVILIVSDD KVWQLGWMIS 60 GDGKLWVQKG WPEFANHYRI GYGHLLLFKH MGKSMFHVTI FDSSNCEINY PPPPSKCPKL 120 QKGIDQSVTQ DDQIGVDTDS GSETGEEQRS RSRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	9e-21	B3 family protein