PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024974897.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 341aa    MW: 38075.7 Da    PI: 6.0654
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024974897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.61.2e-09253296755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ ++RR+ri +++  L++l+P+       K++ +++LekA+ Y+k Lq
  XP_024974897.1 253 IAAKNRRERISERLKVLQDLVPNG-----SKVDLVTMLEKAISYVKFLQ 296
                     5679*******************5.....5******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MAEEERRLAE EERWWAAEER RLAEERQRNP NNMSGLVHQS YTFYGSTAAI NGEFEESTES  60
PEKKGHFAGS SSNSSSLSSP GSATNSGGFL YRTTTNPHQQ QQQPEEGHSV ISFKPGYYDN  120
NFMQGGSKGS CFLSFEEIND EQPYSSTLSP DQLMNLGSGS FDSFRLLENM NCIQSGGTTT  180
IKENSHNEEL ESFSWPNPSS NDHLATQDHQ SSFHKRTHSG ESEQAFKKQC NANSIATKKT  240
KQKSTQPKDP QSIAAKNRRE RISERLKVLQ DLVPNGSKVD LVTMLEKAIS YVKFLQLQVK  300
VLATDEFWPV QGGKPPELSQ VKDAIDAILS SSQRDRSSSS K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.11e-46bHLH family protein