PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024974897.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 341aa MW: 38075.7 Da PI: 6.0654 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.6 | 1.2e-09 | 253 | 296 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ ++RR+ri +++ L++l+P+ K++ +++LekA+ Y+k Lq XP_024974897.1 253 IAAKNRRERISERLKVLQDLVPNG-----SKVDLVTMLEKAISYVKFLQ 296 5679*******************5.....5******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MAEEERRLAE EERWWAAEER RLAEERQRNP NNMSGLVHQS YTFYGSTAAI NGEFEESTES 60 PEKKGHFAGS SSNSSSLSSP GSATNSGGFL YRTTTNPHQQ QQQPEEGHSV ISFKPGYYDN 120 NFMQGGSKGS CFLSFEEIND EQPYSSTLSP DQLMNLGSGS FDSFRLLENM NCIQSGGTTT 180 IKENSHNEEL ESFSWPNPSS NDHLATQDHQ SSFHKRTHSG ESEQAFKKQC NANSIATKKT 240 KQKSTQPKDP QSIAAKNRRE RISERLKVLQ DLVPNGSKVD LVTMLEKAIS YVKFLQLQVK 300 VLATDEFWPV QGGKPPELSQ VKDAIDAILS SSQRDRSSSS K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66470.1 | 1e-46 | bHLH family protein |