PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024974533.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 157aa MW: 18375.2 Da PI: 11.0653 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 60.6 | 2.6e-19 | 30 | 113 | 11 | 99 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 s++l++p +f++++++k + ++l+d+ gr W v + +++ +++l++GW +Fv++++L+ g ++vF++d s+++++v++f + XP_024974533.1 30 RISHQLRIPPDFIKHFDKK--IPGAVILKDLAGRIWHVDI--KQTETGVFLKNGWMRFVNEKRLELGQVMVFRYDT-SSTSFTVRIFGR 113 44678********777655..5668***************..999999**************************87.555569999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MGKRGRGRPS KVSSIFNQDP EFFEIFLPNR ISHQLRIPPD FIKHFDKKIP GAVILKDLAG 60 RIWHVDIKQT ETGVFLKNGW MRFVNEKRLE LGQVMVFRYD TSSTSFTVRI FGRNAIKDED 120 QDSKKPFNSV KKEQESVADP IPIRKSKRNR RKPQKYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 2e-21 | B3 family protein |