PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024974532.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family BES1
Protein Properties Length: 301aa    MW: 32665.5 Da    PI: 8.8672
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024974532.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822216.56.4e-6751471145
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     g+sgr p+wkErEnnkrRERrRRaiaakiyaGLR+qGny+lpk++DnneVlkALc+eAGwvve+DGtty+kg+kp+ ++e+ag s+++s +ss+q
  XP_024974532.1   5 GSSGRLPSWKERENNKRRERRRRAIAAKIYAGLRSQGNYRLPKHCDNNEVLKALCAEAGWVVEEDGTTYPKGCKPT-QNEMAGMSTNISSCSSIQ 98 
                     689*************************************************************************.9***************** PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlsl 145
                      s+ ss+++sp++sy+asp+sssfpsp++ ++ +++s + +lp+l +ls+
  XP_024974532.1  99 PSPMSSSFPSPAPSYQASPTSSSFPSPTRCENPPNHS-SYILPYLCNLSS 147
                     ******************************9998875.677777666655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MTGGGSSGRL PSWKERENNK RRERRRRAIA AKIYAGLRSQ GNYRLPKHCD NNEVLKALCA  60
EAGWVVEEDG TTYPKGCKPT QNEMAGMSTN ISSCSSIQPS PMSSSFPSPA PSYQASPTSS  120
SFPSPTRCEN PPNHSSYILP YLCNLSSLPP LRISNSAPVT PPLSSPTARG TKRKPDWEML  180
SASALQTFRH PLFAASAPTS PTRRHRVPPA TIPECDESDA STVDSGRWVS FQTMAAPTSP  240
TFNLVKPLSQ QGFFQNGSVV QNGGGFEFEF ESSRLKAWEG ERIHEVGADD LELTLGSGKT  300
A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.29e-89BES1 family protein