PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024974398.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 257aa MW: 30050.5 Da PI: 6.7276 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.2 | 5.9e-16 | 11 | 58 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +lv +v+ +G ++W+ Ia+ g++Rt+k+c++rw +yl XP_024974398.1 11 KGPWTEHEDVQLVFYVNTFGDRRWDFIAKVSGLNRTGKSCRLRWVNYL 58 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.4 | 2.8e-17 | 64 | 109 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr+T+ E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++ XP_024974398.1 64 RGRMTPHEERLVLEYHSKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 109 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MRHVEDESIR KGPWTEHEDV QLVFYVNTFG DRRWDFIAKV SGLNRTGKSC RLRWVNYLHP 60 GLKRGRMTPH EERLVLEYHS KWGNRWSRIA RKLPGRTDNE IKNYWRTHMR KKAQESKRGS 120 SPSSSFSNSS SSSSFCTNDP IVDSMPMTET KERSFYDTGG IEMVPNSRPK NNTTLMKYAK 180 DDSEEHEGIY SMDEIWKDID LLEIDDGMKP VFDPYSEIMP SHIWDYSSIN SFWTTDSGQE 240 EFSTYMAFPA TSERLLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46130.1 | 5e-81 | MYB family protein |