PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024974326.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

BES1

Protein Properties

Length: 306aa MW: 33143.1 Da PI: 8.8738

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024974326.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	221.1	2.3e-68	5	152	1	150
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 g+sgr ptwkErEnnkrRERrRRaiaakiyaGLRaqGn+klpk++DnneVlkALc eAGwvve+DGttyrkg+kpl ++++g s+++s +ss+q XP_024974326.1 5 GSSGRLPTWKERENNKRRERRRRAIAAKIYAGLRAQGNFKLPKHCDNNEVLKALCDEAGWVVEEDGTTYRKGCKPL-PSDMGGMSTNISSCSSIQ 98 689***********************************************************************.9************* PP DUF822 96 sslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsssl 150 s+ ss+++sp++sy+asp+sssfpsps+ ++ ++ ++ +lp+l +l++v+ssl XP_024974326.1 99 PSPMSSSFPSPIPSYNASPTSSSFPSPSRCENPPNP-SSYILPFLCNLASVPSSL 152 ****************************999987.589999999999999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MTGGGSSGRL PTWKERENNK RRERRRRAIA AKIYAGLRAQ GNFKLPKHCD NNEVLKALCD 60 EAGWVVEEDG TTYRKGCKPL PSDMGGMSTN ISSCSSIQPS PMSSSFPSPI PSYNASPTSS 120 SFPSPSRCEN PPNPSSYILP FLCNLASVPS SLPPLRISNS APVTPPLSSP TSRGTKRKPD 180 WAMLSSGALQ SFRHPIFAAS APSSPTRGRR HIPPTTIPEC DESDASTIDS DRWVSFQTMA 240 APTSPTFYLV KPSNQQGFVQ NGTMVQPNHG SEFEFESGKV KAWEGERIHE IGTDDLELTL 300 GNGSAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19350.5	3e-91	BES1 family protein