PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024974054.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 358aa MW: 38178.7 Da PI: 5.9417

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024974054.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	77.5	1.6e-24	264	326	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L++eN++L++el++l++e++kl++e+ XP_024974054.1 264 ERELKRQKRKQSNRESARRSRLRKQAECEELQARVEALSNENHSLRDELQRLSEECEKLTAEN 326 89**********************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MGAGEESSPA KHSKPASTQE APPPSYADWS NSMQAYYNAG GTPPFFASTV ASPTPHPYIW 60 GGQHPMMSPY GTPVPYPALY PPAGVYAHPS MPMTPSTAPP NAEMEAKAYE GKERAANKKS 120 KGTSGNGNAV GVRTGESGKA ASSSGNDGAT QSAESGSDGS SDGSEENDQH EYSGGKKGSF 180 NQMLADANAQ NNNSGANIQT SVPGNPLVSM PGTNLNMGMD LWNPSTGSGT MKIRSNPSGV 240 SRTAVPPPMT GREGMMPDQW VQDERELKRQ KRKQSNRESA RRSRLRKQAE CEELQARVEA 300 LSNENHSLRD ELQRLSEECE KLTAENNSIK DDLTRFCGPE AVSKLDAHLQ SRADEGNS

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MGAGEESSPA KHSKPASTQE APPPSYADWS NSMQAYYNAG GTPPFFASTV ASPTPHPYIW  60
GGQHPMMSPY GTPVPYPALY PPAGVYAHPS MPMTPSTAPP NAEMEAKAYE GKERAANKKS  120
KGTSGNGNAV GVRTGESGKA ASSSGNDGAT QSAESGSDGS SDGSEENDQH EYSGGKKGSF  180
NQMLADANAQ NNNSGANIQT SVPGNPLVSM PGTNLNMGMD LWNPSTGSGT MKIRSNPSGV  240
SRTAVPPPMT GREGMMPDQW VQDERELKRQ KRKQSNRESA RRSRLRKQAE CEELQARVEA  300
LSNENHSLRD ELQRLSEECE KLTAENNSIK DDLTRFCGPE AVSKLDAHLQ SRADEGNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	281	287	RRSRLRK
2	281	288	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	4e-99	bZIP family protein