PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024974014.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 443aa MW: 48965.7 Da PI: 8.8523

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024974014.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.5	3.9e-10	156	193	3	40
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 e k rr+++NReAAr+sR+RKka++++Le+ +L++ XP_024974014.1 156 EQKTLRRLAQNREAARKSRLRKKAYVQQLENSRMKLTQ 193 56889*************************97666654 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MGSKSLKVGG KANSSVGGSM PSFVSQIPIS NSNGTEGNTG HSSRVSNLVA PEQSLGFRGG 60 VYNSTSLIDQ AVHPDLQFGT YEKMFQGQNR SQSNQVSNSG GNREAWLESN LADGSPHTDT 120 STEMDPDDKN QGFDIDPSNP FLASGSSDKQ KEKFPEQKTL RRLAQNREAA RKSRLRKKAY 180 VQQLENSRMK LTQLEQEVQR ARKQGVVISN SGDQSQPNGG NGSLAFVAEY SRWLEEQSKH 240 INELRTAVTS YRSDGELRSI VENATSHFND IFRLKRTAAK ADVFHIIYGM WTSPAERCFL 300 WIGGFRSSEL LKLLVSHLEP LTEQQLASID HLQQTSLQAE EALSQGMDAL QQSLAETLSS 360 DAPVVPAGSS GMANYMGQMA MAMGKLGTLE NFLRQADHLR EKTLQQMHTI LTTRQSARAL 420 LAIYDYFSRL RALSSLWLAR PQQ

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MGSKSLKVGG KANSSVGGSM PSFVSQIPIS NSNGTEGNTG HSSRVSNLVA PEQSLGFRGG  60
VYNSTSLIDQ AVHPDLQFGT YEKMFQGQNR SQSNQVSNSG GNREAWLESN LADGSPHTDT  120
STEMDPDDKN QGFDIDPSNP FLASGSSDKQ KEKFPEQKTL RRLAQNREAA RKSRLRKKAY  180
VQQLENSRMK LTQLEQEVQR ARKQGVVISN SGDQSQPNGG NGSLAFVAEY SRWLEEQSKH  240
INELRTAVTS YRSDGELRSI VENATSHFND IFRLKRTAAK ADVFHIIYGM WTSPAERCFL  300
WIGGFRSSEL LKLLVSHLEP LTEQQLASID HLQQTSLQAE EALSQGMDAL QQSLAETLSS  360
DAPVVPAGSS GMANYMGQMA MAMGKLGTLE NFLRQADHLR EKTLQQMHTI LTTRQSARAL  420
LAIYDYFSRL RALSSLWLAR PQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.1	1e-139	bZIP family protein