PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024973804.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 621aa MW: 69314.8 Da PI: 4.9672 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.9 | 7.6e-13 | 456 | 502 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++ ++f Lr+l+P +K++Ka+iL ++eY+k+L+ XP_024973804.1 456 NHVLAERRRREKLSERFIILRSLVPLV-----TKMDKASILGDTIEYVKQLR 502 7999**********************8.....8*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 621 aa Download sequence |
MMAAAGPPYD GLKRMLQSAV QSVQWTYTIF WKFCPQGRVL VWGDGYYNGA IKTRKTVQSV 60 EVSTEEAALS RSEQLRELYD SLETGDHQVT DNQQQPPIRR PSVALSPEDL TESEWFYLMC 120 VSFSFPPGVG LVGEAYAKQQ QLWLTGANEV DSKVFTRAIL AKSAHIQTVV CIPLLNGVVE 180 LGTTEKVEEA VEFVRHVKTF FTVDNDNHRI LPPPPKPALS AHSSNTALST HQIPATINLP 240 ENGYSMDEDD VENDDEDEEE DDDEEEENGS DFEAETGHLS EGGHDEDKSG MAAAVEDVNE 300 LLEVDMSEDI RFGSPNDGSS HFDSGFQLLP RSQADSCRAE SPPRWSDSLE LHQLHASAEP 360 EDDHYSRTVS TILHNQLRRW SDDSQSAASG RNSLLYTTQS SFTMWTSTHH PKTTPSNSQW 420 LLKYMLYTVP FLHTKSKSLD SVPKTMTSHE ELMSANHVLA ERRRREKLSE RFIILRSLVP 480 LVTKMDKASI LGDTIEYVKQ LRKKIQDLEA LDHSSSKMRK IRVAEGSGGR TAVAVQVEVS 540 IIESDALVEI QCLHREGLLL DVMKKLRELG VEITTVQSCV NGGMCMAEMR AKVKAKGNNG 600 KKISIMQVKK AIGQIVSPSL Y |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 461 | 466 | ERRRRE |
2 | 462 | 467 | RRRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09820.1 | 5e-89 | bHLH family protein |