PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024973693.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ZF-HD
Protein Properties Length: 263aa    MW: 28842.2 Da    PI: 8.6018
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024973693.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer82.74.2e-262983659
     ZF-HD_dimer  6 YkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59
                       ClkNhAa  Gg+a+DGCgEfm +++++ ++ ++lkC  CgCHRnFH rev++
  XP_024973693.1 29 LGRCLKNHAAGAGGYALDGCGEFMLAPTSTpTDLTTLKCDVCGCHRNFHYREVDQ 83
                    568*************************999********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
METPTPGQPN RMGQQLPPSH NPPQVTLALG RCLKNHAAGA GGYALDGCGE FMLAPTSTPT  60
DLTTLKCDVC GCHRNFHYRE VDQLQSPAER VDVIENPNQP QQHHHLPTTP TPTRLVAMAN  120
SSSIPNSPTP SPISSSYNYY PAPPHMFFAF NPAGFPAPEP ADRNGQSILT TGSNGTRKKR  180
FRSKFSQDQK AKMQEFAERI GWKMPKKEDE TIAGFCNEIG VDKGVFKVWM HNHKNISIRE  240
NNHQKHRDDG GNANGANGSS SSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.13e-23ZF-HD family protein