PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024973600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | GeBP | ||||||||
Protein Properties | Length: 409aa MW: 45167.6 Da PI: 4.4306 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 118 | 5.1e-37 | 115 | 214 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92 lfqrlw++eDei lLqG++d+++++g+ + ++d+ afy+++k++++++++k+qlveK+rrLKkK+++ +k++sgke +f+++hdq +f+ls XP_024973600.1 115 LFQRLWNDEDEIELLQGFLDYTTQRGTnnssHHHHDTAAFYDQIKGKLQLDFNKNQLVEKLRRLKKKYRNVLSKISSGKEYVFKSPHDQATFDLS 209 79*************************864333459*********************************************************** PP DUF573 93 kkiWg 97 kiW XP_024973600.1 210 CKIWS 214 ****6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 409 aa Download sequence |
MGSDEEDHPT AVYGEEDIDE EDDEESEEEE HTLQNRHVDE DDVDLIDVME DDEEEDDSMS 60 SAAGEVTIAV AGIPNVTTTV AATPTTATTT TTSLVRSDAI VEVKKPVALD DSRRLFQRLW 120 NDEDEIELLQ GFLDYTTQRG TNNSSHHHHD TAAFYDQIKG KLQLDFNKNQ LVEKLRRLKK 180 KYRNVLSKIS SGKEYVFKSP HDQATFDLSC KIWSGIAATT VSTPATADGG GIDDDEPHNP 240 NPNPNFTFNL NEHNGNDIAD PNSSEKKVPR PRKRSRSSAV KIEENFNQQH QFSQSMGAGA 300 GAGAVAGASN PAIPNVVEET VKSCLLPLFK ELVNNSPNGP CGNSRGLGLG LGGMNMNPFG 360 GSMNFSIGDM TDDKWRKQHI LELEVYSKRL ELMQDQIKSR LEELRSMGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 8e-52 | GeBP family protein |