PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024973578.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

TALE

Protein Properties

Length: 736aa MW: 80153.3 Da PI: 6.7341

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024973578.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.6e-09	496	533	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + XP_024973578.1 496 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 533 664459******************************88 PP
2	BELL	120.8	5.9e-39	357	428	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 er e+q++k+kL s+l+eVd+rY++y+eq+q+v++sF+ v+g g+a pYt+lA+ka+SrhFrcLkdai+ q+ XP_024973578.1 357 ERIEHQRRKVKLSSMLDEVDRRYNHYCEQMQMVVNSFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAISTQL 428 789******************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 736 aa Download sequence
MSQDYIFNFS HGFERSSAQD QQQNHLGHQI RRDKLRVQGF EPPLVGLEQV DEGPGGGGGL 60 PAVYETGAGM LSEMFNFPSG GSNSASELLV NQINYQQQHR NQRPSTAGDW YGNSAQAMQL 120 FLTNPSHESP SSESPSHHHH HNNPPSSSTL HMLLPNTVPS ANSTLHHQQS FGSSTGTGQG 180 HFGPSTQFTW VPPGGTSHEG EGVGGVVDNQ GLSLSLSSTL QHLEAAKVEE LRIGDDSSAA 240 GMLYFNQVGG GDPYRNLNMQ GAGPVMGQTH HPIHIGYGSS SLGVVKVLRN SRYVKAAQEL 300 LEEFCSVGRG QFKKNKSGSK HNNPNQNPTN SGGGGGGGGG GASSSSSKDQ PPLSSTERIE 360 HQRRKVKLSS MLDEVDRRYN HYCEQMQMVV NSFDLVMGFG AAVPYTALAQ KAMSRHFRCL 420 KDAISTQLKH SCELLGEKDA GSSGVTKGET PRLKLLEQSL RQQRAFHQMG MMEQEAWRPQ 480 RGLPERSVNI LRAWLFEHFL HPYPSDADKH LLARQTGLSR NQVSNWFINA RVRLWKPMVE 540 EMYQQESKEE VDHHHHQDDD QDEENKSEGN INYNNQHKNG PASSSPSSAM AQTPMHPPPP 600 PPPATVPTYT TNSTATPAKR SEINDPENDP SILAINTQHC FSENQATTMS YSYTPTITTT 660 GNTSTIPPSF PTTHDADHTC RRGSILDAGD DAAADIGSTL IRFGTSAGDV SLTLGLRHAG 720 NLPEKTSFSV RDFGGC

Sequence ? help Back to Top

Protein Sequence Length: 736 aa Download sequence

MSQDYIFNFS HGFERSSAQD QQQNHLGHQI RRDKLRVQGF EPPLVGLEQV DEGPGGGGGL  60
PAVYETGAGM LSEMFNFPSG GSNSASELLV NQINYQQQHR NQRPSTAGDW YGNSAQAMQL  120
FLTNPSHESP SSESPSHHHH HNNPPSSSTL HMLLPNTVPS ANSTLHHQQS FGSSTGTGQG  180
HFGPSTQFTW VPPGGTSHEG EGVGGVVDNQ GLSLSLSSTL QHLEAAKVEE LRIGDDSSAA  240
GMLYFNQVGG GDPYRNLNMQ GAGPVMGQTH HPIHIGYGSS SLGVVKVLRN SRYVKAAQEL  300
LEEFCSVGRG QFKKNKSGSK HNNPNQNPTN SGGGGGGGGG GASSSSSKDQ PPLSSTERIE  360
HQRRKVKLSS MLDEVDRRYN HYCEQMQMVV NSFDLVMGFG AAVPYTALAQ KAMSRHFRCL  420
KDAISTQLKH SCELLGEKDA GSSGVTKGET PRLKLLEQSL RQQRAFHQMG MMEQEAWRPQ  480
RGLPERSVNI LRAWLFEHFL HPYPSDADKH LLARQTGLSR NQVSNWFINA RVRLWKPMVE  540
EMYQQESKEE VDHHHHQDDD QDEENKSEGN INYNNQHKNG PASSSPSSAM AQTPMHPPPP  600
PPPATVPTYT TNSTATPAKR SEINDPENDP SILAINTQHC FSENQATTMS YSYTPTITTT  660
GNTSTIPPSF PTTHDADHTC RRGSILDAGD DAAADIGSTL IRFGTSAGDV SLTLGLRHAG  720
NLPEKTSFSV RDFGGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-142	TALE family protein