PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024973274.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 92aa MW: 10444.8 Da PI: 7.4207 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.5 | 2.3e-08 | 20 | 60 | 14 | 54 |
HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 d+iN+ ++L +llP+ + + s K+s a +L++++ YIksL XP_024973274.1 20 DQINDLVSKLHQLLPEiR-NRCSDKVSAARVLQETCSYIKSL 60 79**************77.788999****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 92 aa Download sequence |
MSSRRSSRSR PSAPSMITDD QINDLVSKLH QLLPEIRNRC SDKVSAARVL QETCSYIKSL 60 HREVDDLSER LSELLDNTDS TQASIIRSLL MQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47710.1 | 1e-26 | bHLH family protein |