PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024973238.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 195aa MW: 22397.4 Da PI: 8.6072 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.4 | 1.2e-08 | 19 | 66 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +E++RR +++ +eL +l+P+++ sK +i + + YI +Lq XP_024973238.1 19 ERKTIEKNRRTHMKRLCDELTSLVPSLF----SQSSKDSIFDQSIAYIEQLQ 66 5678**********************84....4568888************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MKETTPMMKK CDGGSKKLER KTIEKNRRTH MKRLCDELTS LVPSLFSQSS KDSIFDQSIA 60 YIEQLQKIVE RSTEKRIEAS RLVNKRDRDN TDYDVRDDQP AVTCDGVRLP TVEVKEFDDG 120 LQVRLTSRSK RNFTFSDVVR IVEDGGGEVV NGGYTTLGEK VFYTLHAKAR IPRIGVETTC 180 IYERLQELIN EARKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 3e-14 | bHLH family protein |