PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024973096.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | TALE | ||||||||
Protein Properties | Length: 505aa MW: 57783.2 Da PI: 6.0373 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29.1 | 1.7e-09 | 376 | 413 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe n+yp+ +e+ LA+++gLt +q+ +WF N R + XP_024973096.1 376 FEHflNPYPKDSEKMMLARQTGLTRSQIANWFINARVR 413 664459******************************88 PP | |||||||
2 | BELL | 99.8 | 2.1e-32 | 242 | 313 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+q+lq+k++kL+sll+eVd++Y+ y++ql++v ++ ++vag+g+a++Yt+lA ++iSrhFrcL+dai +q+ XP_024973096.1 242 EKQDLQNKITKLVSLLDEVDRKYREYCQQLRVVEAALDMVAGCGAARSYTTLAHQTISRHFRCLRDAINGQV 313 6899*****************************************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 505 aa Download sequence |
MATYYPSSTN HQFPNSYLST QQQQIDSYQE SPIPPIDMMY QNQNSTDSSF LELLSTNPQN 60 PSRIENHHSL DDQERNLQYQ ELSLSLGMQI TSSSMDLPSF QYNYLNPHLQ DSGDHGSQSN 120 KVENIDYLSF DLVGGVSGVV KDRSTNHGQC SISGYQIPTG VVARIYNSRY LKPSQELLEE 180 VANLHEAIRQ IKMNKRNNLH KLGVDRFDEK NSRIDSQSVR SSINGEPLES ITSSSGQLSA 240 SEKQDLQNKI TKLVSLLDEV DRKYREYCQQ LRVVEAALDM VAGCGAARSY TTLAHQTISR 300 HFRCLRDAIN GQVQATRQSL GDQDDSSDRV LPRLRNVEKQ LRQQGSLHPL GVMRHSWRPQ 360 RGLPEGSVSL LRAWLFEHFL NPYPKDSEKM MLARQTGLTR SQIANWFINA RVRLWKPMVE 420 DMYKEEFRDQ EVNGRSSPKA AIDQSWSSED KEKDLQPKTS SRINDSNPEF VNDMEVNGYV 480 AQRHIDLADQ YRFDDPQLLP DFVVE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16400.1 | 1e-100 | TALE family protein |