PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024973095.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

TALE

Protein Properties

Length: 505aa MW: 57783.2 Da PI: 6.0373

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024973095.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.1	1.7e-09	376	413	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe n+yp+ +e+ LA+++gLt +q+ +WF N R + XP_024973095.1 376 FEHflNPYPKDSEKMMLARQTGLTRSQIANWFINARVR 413 664459******************************88 PP
2	BELL	99.8	2.1e-32	242	313	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+q+lq+k++kL+sll+eVd++Y+ y++ql++v ++ ++vag+g+a++Yt+lA ++iSrhFrcL+dai +q+ XP_024973095.1 242 EKQDLQNKITKLVSLLDEVDRKYREYCQQLRVVEAALDMVAGCGAARSYTTLAHQTISRHFRCLRDAINGQV 313 6899*****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MATYYPSSTN HQFPNSYLST QQQQIDSYQE SPIPPIDMMY QNQNSTDSSF LELLSTNPQN 60 PSRIENHHSL DDQERNLQYQ ELSLSLGMQI TSSSMDLPSF QYNYLNPHLQ DSGDHGSQSN 120 KVENIDYLSF DLVGGVSGVV KDRSTNHGQC SISGYQIPTG VVARIYNSRY LKPSQELLEE 180 VANLHEAIRQ IKMNKRNNLH KLGVDRFDEK NSRIDSQSVR SSINGEPLES ITSSSGQLSA 240 SEKQDLQNKI TKLVSLLDEV DRKYREYCQQ LRVVEAALDM VAGCGAARSY TTLAHQTISR 300 HFRCLRDAIN GQVQATRQSL GDQDDSSDRV LPRLRNVEKQ LRQQGSLHPL GVMRHSWRPQ 360 RGLPEGSVSL LRAWLFEHFL NPYPKDSEKM MLARQTGLTR SQIANWFINA RVRLWKPMVE 420 DMYKEEFRDQ EVNGRSSPKA AIDQSWSSED KEKDLQPKTS SRINDSNPEF VNDMEVNGYV 480 AQRHIDLADQ YRFDDPQLLP DFVVE

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MATYYPSSTN HQFPNSYLST QQQQIDSYQE SPIPPIDMMY QNQNSTDSSF LELLSTNPQN  60
PSRIENHHSL DDQERNLQYQ ELSLSLGMQI TSSSMDLPSF QYNYLNPHLQ DSGDHGSQSN  120
KVENIDYLSF DLVGGVSGVV KDRSTNHGQC SISGYQIPTG VVARIYNSRY LKPSQELLEE  180
VANLHEAIRQ IKMNKRNNLH KLGVDRFDEK NSRIDSQSVR SSINGEPLES ITSSSGQLSA  240
SEKQDLQNKI TKLVSLLDEV DRKYREYCQQ LRVVEAALDM VAGCGAARSY TTLAHQTISR  300
HFRCLRDAIN GQVQATRQSL GDQDDSSDRV LPRLRNVEKQ LRQQGSLHPL GVMRHSWRPQ  360
RGLPEGSVSL LRAWLFEHFL NPYPKDSEKM MLARQTGLTR SQIANWFINA RVRLWKPMVE  420
DMYKEEFRDQ EVNGRSSPKA AIDQSWSSED KEKDLQPKTS SRINDSNPEF VNDMEVNGYV  480
AQRHIDLADQ YRFDDPQLLP DFVVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-100	TALE family protein