PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024972591.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 243aa MW: 28028 Da PI: 9.078 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.8 | 1e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_024972591.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 100.9 | 1.7e-33 | 81 | 173 | 8 | 100 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 s+ e+++++ ++e+ +Lk+++e Lqr+qR+llGedL +L+ keL++Le+qLe sl+kiRs+K++ +l+q+ +lq+ke+ l e+nkaLrkklee XP_024972591.1 81 SQPENESQYNYHEYLRLKARVEVLQRSQRNLLGEDLAPLNTKELEHLEHQLEMSLRKIRSTKTQCMLDQLADLQRKEQVLAETNKALRKKLEE 173 4678999***********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS 60 SSMVKTLEKY HSCSYGSLKA SQPENESQYN YHEYLRLKAR VEVLQRSQRN LLGEDLAPLN 120 TKELEHLEHQ LEMSLRKIRS TKTQCMLDQL ADLQRKEQVL AETNKALRKK LEESAQEFPV 180 RQMWEGAQTI PYNPLPTHSE DFFQPLGLNS AMHNRYNPIG SDEMNVAGVN ANHPNGLFPG 240 WML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 8e-97 | MIKC_MADS family protein |