PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024972132.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 570aa MW: 63386.3 Da PI: 8.6128 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 53.4 | 4.5e-17 | 18 | 99 | 12 | 99 |
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + + l +p kf ++ +gk+++ t++l+ +sg++W l + ++ ++ +GW Fv+++ L+ gD++vF++dg+ f +v++f++ XP_024972132.1 18 SFDKLKIPSKFGKHLEGKTAG--TVSLMGPSGNTWHADL--AHQTDGLFILDGWAAFVRDHFLENGDSLVFRYDGNLHF--TVQIFDQ 99 456799******777999766..8***************..99999988889*********************997777..9**9997 PP | |||||||
2 | B3 | 45.9 | 1e-14 | 248 | 332 | 11 | 98 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + s l +p +fa ++ ++++++++l +++g+sW+v+ i ++ + ++++ +GW +Fv+ n+++++D+++F+l+g+ e l+v ++r XP_024972132.1 248 SGSYTLNVPYQFAMAYL--PNCKVKIVLHNLKGESWTVNSIPtTRVQTSHTFCGGWLSFVRGNNINVRDVCIFELVGKCE--LRVNILR 332 55667999*****9996..4699*****************77566666699************************99544..4888876 PP | |||||||
3 | B3 | 48.4 | 1.7e-15 | 457 | 544 | 7 | 95 |
.-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 + + + s l +p +f eh +++ ++++l +++g+ W+v+ i + k ++ +++ +GW Fv++ng++ gD+++F+l+gr e + +v+ XP_024972132.1 457 KFNIGGSYTLKIPYQFSMEHL--PNCRTEIVLHNLKGECWTVNSIPTLKVQTlHTFCGGWMAFVRDNGIQMGDICIFELVGRCEMRVHVS 544 55556677899*****99996..45889****************8866666679999***********************9877755554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 570 aa Download sequence |
MMNARRPHFI KGFNPNISFD KLKIPSKFGK HLEGKTAGTV SLMGPSGNTW HADLAHQTDG 60 LFILDGWAAF VRDHFLENGD SLVFRYDGNL HFTVQIFDQS SCEKETAFSA ECHQDLSIFD 120 QHFGKKRERE YATMLTNMVD GVPKKARSSQ VHSECVTKYH ETTNIAEMQL GLQETMNGRC 180 EVADFLNGSE FCGSAFKDSI TPALPVSEVS PTEDELGRLS ASEADKIAQS FTSSFPHFTQ 240 VMKRFNISGS YTLNVPYQFA MAYLPNCKVK IVLHNLKGES WTVNSIPTTR VQTSHTFCGG 300 WLSFVRGNNI NVRDVCIFEL VGKCELRVNI LRVRQEAQDY EHDDVKGLAN GASHKSSGRL 360 TKKVKGNSRK TQKPTMIEGQ KVAFSIEKVK LGIAAKGTVL GSHSRTSNGK SGKPKSLQEK 420 RGSSMLGCMS MKSAPEEKIA AESFISSFPY FVRVMKKFNI GGSYTLKIPY QFSMEHLPNC 480 RTEIVLHNLK GECWTVNSIP TLKVQTLHTF CGGWMAFVRD NGIQMGDICI FELVGRCEMR 540 VHVSSVGKNV ALDYQIGHGP SNELDNGSSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 5e-16 | B3 family protein |