PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024972012.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 244aa MW: 27282.2 Da PI: 8.6538 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.3 | 9e-19 | 38 | 87 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++ +g+Wv+eIr+p + r r++lg+f +a eAa a++aa+++l+g XP_024972012.1 38 TYKGVRQRT-WGKWVSEIREP---N-RgSRVWLGTFNSAREAAIAYDAAARRLYG 87 69****999.**********8...3.35*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MLNVGNNGGG GRRRTTAQAS SRKGCMRGKG GPENASCTYK GVRQRTWGKW VSEIREPNRG 60 SRVWLGTFNS AREAAIAYDA AARRLYGPNA HVNLPDEAHD SAPPPPPAVT EAAKEARYHR 120 ALEQMKKQQE FERQIQIYMH QQNQNQKIKV ENMEISDLNG QTVANYHHFQ NHKINHDPRN 180 GENYVDPKSS TGNLNANLPE FDDSRLWTEA ASTMDYQSQA IDPGIAASTF NDTIGIELNH 240 PLMV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 8e-38 | ERF family protein |