PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024971872.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 324aa    MW: 35868.6 Da    PI: 4.3995
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024971872.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.20.000692723121054
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r R +++++ +  L  l+P     +++K   ++iL +A++Y++ L
  XP_024971872.1 272 RSRKENLRETIRILENLIPGE---KNGKDA-MMILDEAINYLRIL 312
                     778899***************...9**976.9*********9866 PP

Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MEKGFASWFQ DQQIDWQSTI PNSSIAPFGL RHQLNVPSFG NTTDENPPVF AFAESKPEEP  60
CGWFHGLPRC HPEVNPILKE QLPVPGSRAT HEIQKKFLVF DQSNDRTTLI YSSAPIQYHL  120
PKPQLNLNLT KEFSVIEKHE DIGCSNPFHD DGKDEGSEMH EDTDELRALL YSDDDEIDYS  180
EDEEEQSTGH SPSTMTGFDR LESTDENGEE VTSSMGPQKR HKLDSGGYDV VDTASSGKSG  240
INCSGEAEVS SCGGGVADVD VGSESFAVAG KRSRKENLRE TIRILENLIP GEKNGKDAMM  300
ILDEAINYLR ILKVKAKALG LDSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.18e-08bHLH family protein