PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024971872.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 324aa MW: 35868.6 Da PI: 4.3995 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.2 | 0.00069 | 272 | 312 | 10 | 54 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r R +++++ + L l+P +++K ++iL +A++Y++ L XP_024971872.1 272 RSRKENLRETIRILENLIPGE---KNGKDA-MMILDEAINYLRIL 312 778899***************...9**976.9*********9866 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MEKGFASWFQ DQQIDWQSTI PNSSIAPFGL RHQLNVPSFG NTTDENPPVF AFAESKPEEP 60 CGWFHGLPRC HPEVNPILKE QLPVPGSRAT HEIQKKFLVF DQSNDRTTLI YSSAPIQYHL 120 PKPQLNLNLT KEFSVIEKHE DIGCSNPFHD DGKDEGSEMH EDTDELRALL YSDDDEIDYS 180 EDEEEQSTGH SPSTMTGFDR LESTDENGEE VTSSMGPQKR HKLDSGGYDV VDTASSGKSG 240 INCSGEAEVS SCGGGVADVD VGSESFAVAG KRSRKENLRE TIRILENLIP GEKNGKDAMM 300 ILDEAINYLR ILKVKAKALG LDSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21330.1 | 8e-08 | bHLH family protein |