PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024971734.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 231aa MW: 25752.7 Da PI: 7.7028 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 51.8 | 1.5e-16 | 92 | 137 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn E+rRR+riN+++ L++l+P++ K +Ka++L +A+eY+k+Lq XP_024971734.1 92 HNLSEKRRRSRINEKLKALQTLVPNS-----NKTDKASMLDEAIEYLKQLQ 137 9************************7.....5******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MADLYGTNND RSFSSSSSLE SEDMSFFLQS FLNNSSTKGN SFYGTETNQV NFPPRHDVAG 60 FDLGCEVQKQ SEGRQNSNPP RSSKRARAAE IHNLSEKRRR SRINEKLKAL QTLVPNSNKT 120 DKASMLDEAI EYLKQLQLKV QTLTMRNGLG LQQPIYSQQE EMEMEMGANP SQGGFSIDIG 180 NGHMPSLSHM MKQDNVFGSQ VNQYHHVFTN HSTSIKEIGC LNGKIPSPGV S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36930.1 | 6e-25 | bHLH family protein |