PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024971502.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

BES1

Protein Properties

Length: 305aa MW: 33227.3 Da PI: 9.0525

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024971502.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	189.7	1.1e-58	16	144	1	133
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspessl 94 gg++rkp+w+E+Enn+rRERrRRaiaa iy GLR qGny+lpk++DnneVlkA c+eAGwvv +DGtt+rkgskp+ + e+ ++s++++ +++ XP_024971502.1 16 GGGRRKPSWREKENNRRRERRRRAIAANIYNGLRTQGNYNLPKHCDNNEVLKAVCKEAGWVVLPDGTTFRKGSKPPlASIETCNTSTTTTNTTP- 109 689***********************************************************************666777777766666666. PP DUF822 95 qsslkssalaspvesysaspksssfpspssldsislasa 133 +ss+++sp++sy++sp+sssfpsps++ + s+ XP_024971502.1 110 ----SSSQKPSPIPSYQCSPSSSSFPSPSNSFAYAIPSS 144 ....5699*******************9887777655 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MREGGSSSVS AAVEGGGGRR KPSWREKENN RRRERRRRAI AANIYNGLRT QGNYNLPKHC 60 DNNEVLKAVC KEAGWVVLPD GTTFRKGSKP PLASIETCNT STTTTNTTPS SSQKPSPIPS 120 YQCSPSSSSF PSPSNSFAYA IPSSLPSLRI SNSAPVTPPL SSPTSKFPKD NNLNWESFSK 180 QSISSFNLPF FASSAPTSPT RYQRIMPATI PECDESDCST IGSCQWMRFK NYEPMMMMMN 240 PNSPTFNLVK PMAPVAATMD AGSEKGKGME FEFENGGVKA WEGERIHDVG LDDLELTLGS 300 GIAKT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	19	38	RRKPSWREKENNRRRERRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75080.2	4e-79	BES1 family protein