PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024971493.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 503aa MW: 55802.1 Da PI: 8.0408 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 53.5 | 4.3e-17 | 234 | 283 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lr+++P+ ++K +Ka+ L +++eYI+ Lq XP_024971493.1 234 RSKHSATEQRRRSKINDRFSMLRDIIPHG----DQKRDKASFLLEVIEYIQFLQ 283 899*************************7....7*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 503 aa Download sequence |
MELPQPHSYG TQGRKPTHDF LSLRSPAHQD PTLTPPGRYL KTYDLLQPLV GKNGDEIRST 60 EKPMSNILPS GIGSYSINHI SYINQSHRSS KPEAAQSSSS DRNDENSKGS SYTAGNGNGF 120 KLWEESAGNK GKTGKENIAG NRHIIREGDM KIGGVPWITS PSQSSSIHNH PTTNIGYPHS 180 AQKNQSFVDM LKSAKPSQEN VDDNDGEFVI KTETSSHRKV KVEPKPDQTP NILRSKHSAT 240 EQRRRSKIND RFSMLRDIIP HGDQKRDKAS FLLEVIEYIQ FLQEKLHKYE DSYQGWSSEP 300 PKTIPWNSQR PTQVPNGASG PAMVYAAAKL DENNISIAPN IPREGQNLLD TDMSRLDSIK 360 EIDQSTKEAS SFPMALQPNI CAAAPLSRHE PEFCHSRLCA TDCSVKWDNK LKEQELIIEN 420 GTISISTIYS QGLLSTLTQA LQSSGVELSR ASISIQIDLG KRAYPNSSTP NFKKTQIVGV 480 DASGREEEEN DKGLKRLKTS IND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08130.2 | 1e-80 | bHLH family protein |