PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024971490.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 515aa    MW: 57158.7 Da    PI: 7.7059
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024971490.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH53.54.4e-17246295255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r +h++ E+rRR++iN++f+ Lr+++P+     ++K +Ka+ L +++eYI+ Lq
  XP_024971490.1 246 RSKHSATEQRRRSKINDRFSMLRDIIPHG----DQKRDKASFLLEVIEYIQFLQ 295
                     899*************************7....7*******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    
MELPQPHSYG TQGRKPTHDF LSLRSPAHQD PTLTPPGRYL KTYDLLQPLV GKNGDEIRST  60
EKPMSNILPS GIGSYSINHI SYINQSHRSS KPEAAQSSSS DRNDENSKGS SYTAGNGNGF  120
KLWEESAGNK GKTGKENIAG NRHIIREGDM KIGGVPWITS PSQSSSIHNH PTTNIGYPWY  180
VGIFCSHSAQ KNQSFVDMLK SAKPSQENVD DNDGEFVIKT ETSSHRKDVV SVKVEPKPDQ  240
TPNILRSKHS ATEQRRRSKI NDRFSMLRDI IPHGDQKRDK ASFLLEVIEY IQFLQEKLHK  300
YEDSYQGWSS EPPKTIPWNS QRPTQVPNGA SGPAMVYAAA KLDENNISIA PNIPREGQNL  360
LDTDMSRLDS IKEIDQSTKE ASSFPMALQP NICAAAPLSR HEPEFCHSRL CATDCSVKWD  420
NKLKEQELII ENGTISISTI YSQGLLSTLT QALQSSGVEL SRASISIQID LGKRAYPNSS  480
TPNFKKTQIV GVDASGREEE ENDKGLKRLK TSIND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08130.21e-81bHLH family protein