PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024971490.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 515aa MW: 57158.7 Da PI: 7.7059 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 53.5 | 4.4e-17 | 246 | 295 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lr+++P+ ++K +Ka+ L +++eYI+ Lq XP_024971490.1 246 RSKHSATEQRRRSKINDRFSMLRDIIPHG----DQKRDKASFLLEVIEYIQFLQ 295 899*************************7....7*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 515 aa Download sequence |
MELPQPHSYG TQGRKPTHDF LSLRSPAHQD PTLTPPGRYL KTYDLLQPLV GKNGDEIRST 60 EKPMSNILPS GIGSYSINHI SYINQSHRSS KPEAAQSSSS DRNDENSKGS SYTAGNGNGF 120 KLWEESAGNK GKTGKENIAG NRHIIREGDM KIGGVPWITS PSQSSSIHNH PTTNIGYPWY 180 VGIFCSHSAQ KNQSFVDMLK SAKPSQENVD DNDGEFVIKT ETSSHRKDVV SVKVEPKPDQ 240 TPNILRSKHS ATEQRRRSKI NDRFSMLRDI IPHGDQKRDK ASFLLEVIEY IQFLQEKLHK 300 YEDSYQGWSS EPPKTIPWNS QRPTQVPNGA SGPAMVYAAA KLDENNISIA PNIPREGQNL 360 LDTDMSRLDS IKEIDQSTKE ASSFPMALQP NICAAAPLSR HEPEFCHSRL CATDCSVKWD 420 NKLKEQELII ENGTISISTI YSQGLLSTLT QALQSSGVEL SRASISIQID LGKRAYPNSS 480 TPNFKKTQIV GVDASGREEE ENDKGLKRLK TSIND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08130.2 | 1e-81 | bHLH family protein |