PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024971446.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 249aa MW: 27888.7 Da PI: 8.0371 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.8 | 7.9e-13 | 71 | 122 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h+e Er+RR+++ + + Lr+llP + ++K s ++ +Av+YIk++q XP_024971446.1 71 KLIHKELERQRRKDMAKLCSSLRSLLPLEF--IKGKRSTSDHMHQAVNYIKHMQ 122 567*************************65..*********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MFSFLQSDDL VFHEVGQQDL PVDLQDHVTM ERNINYPAIK TRKRPGDLST SKPNPVHADR 60 VGDGKDDAQR KLIHKELERQ RRKDMAKLCS SLRSLLPLEF IKGKRSTSDH MHQAVNYIKH 120 MQENIKVQGA QRDQLIKKFA GMSARHLGSM NTNESLTNLL PNTVSVNPCN GGIEILINSC 180 SIQDGFSLSG VLKALVEEGL NIISCTSTKV SERLFHTIQS EVNNEPAWTD PSALQQRLTA 240 IANNHLNVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25400.1 | 3e-39 | bHLH family protein |