PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024971312.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 247aa MW: 27646.2 Da PI: 7.7825 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.1 | 3.2e-13 | 57 | 103 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+E+rRRdriN + +Lr+l+ ++ K++Ka+ L k+ve++k+L XP_024971312.1 57 KNHSEAEKRRRDRINAHLTTLRRLVSNS-----DKMDKASLLGKVVEHVKEL 103 78***********************997.....7****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MDNLYSSWIQ DADPFSTWDH HSLLPPTLHQ LTASDDHGGC SNGGGQSEDG KATAASKNHS 60 EAEKRRRDRI NAHLTTLRRL VSNSDKMDKA SLLGKVVEHV KELKSETKEL SKVSTIPTDL 120 DEVIIDLDSG TVDPNTSVFI RASLCCEDRR EVFSEIKHAL KSLRLTVVQA DMTCLGGRMK 180 CNLILCVTNN NPSKIDEKEL TMLKHSLKIL FGRIVSSSSW TTSTNYRIKS KRQRFFCSSN 240 YNANDCE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 229 | 234 | KSKRQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 1e-41 | bHLH family protein |