PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024971261.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 267aa MW: 30690.8 Da PI: 6.6321 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 139.9 | 1.5e-43 | 9 | 135 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+G+rF+Ptdeel++++L+ k++g + e+ + i+evdi+k+ePwdLp +++++ ++ew+fF ++d+k +g+r+ ratk gyWk tg+d++++ XP_024971261.1 9 LPVGYRFRPTDEELINHFLRLKINGYHKEV-DYIQEVDICKTEPWDLPglSQIESIDDEWFFFNRKDHK--NGHRSARATKCGYWKPTGRDRTIK 100 799************************999.99***************6448888889*******9997..689********************9 PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyr 127 ++ + ++g kktLvf++gr+pkg++t+Wv+hey XP_024971261.1 101 TSkGFLEIGKKKTLVFHTGRSPKGVRTRWVIHEYV 135 9734456***************************5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MEVGPVYTLP VGYRFRPTDE ELINHFLRLK INGYHKEVDY IQEVDICKTE PWDLPGLSQI 60 ESIDDEWFFF NRKDHKNGHR SARATKCGYW KPTGRDRTIK TSKGFLEIGK KKTLVFHTGR 120 SPKGVRTRWV IHEYVPTLNE LDGTAPGQDF PEVERALDDL WDPSSEHGLV VNKQQEPSTF 180 IRVGNYSVQN KYNGKVILNL DEKLSPTASD VASTMNWDSD EVYNAEIIAR EPLLSWKAIE 240 IGGEESLLLR GMRKVLGCLG LWKCFNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 2e-61 | NAC family protein |