PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024971007.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 350aa    MW: 38801.8 Da    PI: 5.8
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024971007.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.96.6e-12147198155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h  +Er+RR+++N+ ++ +r+l+P++   + ++ + a+i   A++++k+L+
  XP_024971007.1 147 QRMTHITVERNRRKQMNEYLAVIRSLMPPS---YVQRGDQASIIGGAINFVKELE 198
                     79****************************...9******************995 PP

Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MALDTVIYPQ DQFGVWGYDY LIQEEKSLCG FLESNNLFPN HEQAASVHAN NWDYCSSSSV  60
MQNHNSCYDM KDHWGTISSP DDCTGGGSGG GGGGDQMISS ELESPHCNMM MESHVGAALT  120
TNTVASAGRR KRRRTKSGKN KEELENQRMT HITVERNRRK QMNEYLAVIR SLMPPSYVQR  180
GDQASIIGGA INFVKELEQQ LQTLEVQKRA MHQQPNSVNG YSPPPLPFGE FFTFPQYSMK  240
SANEVSGNGG GSVAVADNRP LAMAEIEVTM VESHANLKIL SKKRYRQLLK IVAGLQCLWL  300
TILHLNVTTV DQMVLYSLSV KLEDGCQLST VDEIADAVNC LLGRIEEEAL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130134RKRRR
2130135RKRRRT
3148159RMTHITVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.12e-76bHLH family protein