PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024971007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 350aa MW: 38801.8 Da PI: 5.8 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.9 | 6.6e-12 | 147 | 198 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h +Er+RR+++N+ ++ +r+l+P++ + ++ + a+i A++++k+L+ XP_024971007.1 147 QRMTHITVERNRRKQMNEYLAVIRSLMPPS---YVQRGDQASIIGGAINFVKELE 198 79****************************...9******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
MALDTVIYPQ DQFGVWGYDY LIQEEKSLCG FLESNNLFPN HEQAASVHAN NWDYCSSSSV 60 MQNHNSCYDM KDHWGTISSP DDCTGGGSGG GGGGDQMISS ELESPHCNMM MESHVGAALT 120 TNTVASAGRR KRRRTKSGKN KEELENQRMT HITVERNRRK QMNEYLAVIR SLMPPSYVQR 180 GDQASIIGGA INFVKELEQQ LQTLEVQKRA MHQQPNSVNG YSPPPLPFGE FFTFPQYSMK 240 SANEVSGNGG GSVAVADNRP LAMAEIEVTM VESHANLKIL SKKRYRQLLK IVAGLQCLWL 300 TILHLNVTTV DQMVLYSLSV KLEDGCQLST VDEIADAVNC LLGRIEEEAL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 130 | 134 | RKRRR |
2 | 130 | 135 | RKRRRT |
3 | 148 | 159 | RMTHITVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 2e-76 | bHLH family protein |