PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024970912.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 213aa MW: 24501.3 Da PI: 8.7924 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.2 | 2.9e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l +v+++G +W+ +++ g+ R++k+c++rw +yl XP_024970912.1 14 KGAWSEEEDDQLRAYVHRYGHWNWRELPKYAGLARCGKSCRLRWMNYL 61 79******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 55.5 | 1.3e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++l+ +++k +G++ W++Ia++++ gR+++++k++w+++l XP_024970912.1 67 RGNFSKEEEDLIEKYHKDMGNK-WSAIAAKLP-GRSDNEIKNHWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MVRAPCVDKN GIKKGAWSEE EDDQLRAYVH RYGHWNWREL PKYAGLARCG KSCRLRWMNY 60 LRPTVKRGNF SKEEEDLIEK YHKDMGNKWS AIAAKLPGRS DNEIKNHWHT HLKKRTPKPV 120 QDISKKEEQS SSVEQIMLFT GQPPSVVSTS NTNVISNESS ASHRISDESS AFHRPTIESL 180 ASQRTSDDSS SHSSGVERRL FIDLNQEYVE TLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 2e-57 | MYB family protein |