PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024970615.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 225aa MW: 25397.3 Da PI: 5.8504 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.3 | 2.3e-10 | 21 | 66 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 W+ Ed+l+ da +++ + +W +Ia ++ g+t++q++ ++ XP_024970615.1 21 TWSRYEDKLFEDALVMYPDDvvgRWQKIADAVP-GKTAEQVRAHYEV 66 7*****************99*************.**********965 PP | |||||||
2 | Myb_DNA-binding | 44.1 | 4.7e-14 | 125 | 169 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+W++I+r + Rt+ q+ s+ qky XP_024970615.1 125 PWTEEEHRLFLIGLQRYGKGDWRSISRNVVVSRTPTQVASHAQKY 169 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MYHQDTDWAI DAAAAVAAES TWSRYEDKLF EDALVMYPDD VVGRWQKIAD AVPGKTAEQV 60 RAHYEVLVHD LLQIDSGQVE LPSYADDDGD ESFLSWDPEL RASQISFGMG KGSKHGDGER 120 KKGTPWTEEE HRLFLIGLQR YGKGDWRSIS RNVVVSRTPT QVASHAQKYF LRQNSMKKER 180 KRSSIHDITT TAETMAVPPP PPTNFHGGAT PPLGYERQQN FGYPM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 3e-76 | MYB family protein |