PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024970325.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB_related | ||||||||
Protein Properties | Length: 294aa MW: 32288.2 Da PI: 6.6056 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.6 | 2.4e-12 | 47 | 91 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+ E++++++a +++ + Wk+I + +g +t q++s+ qky XP_024970325.1 47 RESWTEPEHDKFLEALQLFDRD-WKKIEAFIG-SKTVIQIRSHAQKY 91 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MGMALPNIGS FSSSPTAAVA PPSTNSSSSA DDASKKIRKP YTITKSRESW TEPEHDKFLE 60 ALQLFDRDWK KIEAFIGSKT VIQIRSHAQK YFLKVQKSGT NEHLPPPRPK RKAAHPYPQK 120 APKNASFQTS PASTDPEFNP SDPSAVVKNQ VETGSLSGIG IDDMVSGGQP EAVNCCSSNA 180 NAPKTQTSEI REQRSHGLPS RVLPDFAQVY GFIGSVFDPN TDSHLHRLKK MDPIDVETVL 240 LLMRNLSINL TSPDFEDHRK LLSTYEVVSE KENSDVAVDA LLECQPEEVG HFGT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.2 | 2e-92 | MYB_related family protein |