PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024970258.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

TALE

Protein Properties

Length: 449aa MW: 50311.5 Da PI: 5.8096

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024970258.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.4e-09	317	354	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe n+yp+ +e+ LAk++gLt +q+ +WF N R + XP_024970258.1 317 FEHflNPYPKDSEKIILAKQTGLTRSQIANWFINARVR 354 665559******************************88 PP
2	BELL	100.6	1.2e-32	183	254	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+q+lq+k++kL sll+eVd++Y+ y++qlq+v ++ ++v g+g+a+pYt+lA ++iSrhFrcL+dai +qi XP_024970258.1 183 EKQDLQNKITKLFSLLDEVDRKYRDYCQQLQIVEAALDVVSGCGAARPYTALAHQTISRHFRCLRDAINGQI 254 6899******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MATYYPTSSN HQRDVFPSSY LSSQQQLDSY QESSCPPADM MYQNQNSTDA SFLELLSGSN 60 DHGSQSNKVE QVDYLSFGLV GGANSTTKSG AINNGHCSIS DTYDVSYGIV GTILDSKYLK 120 PSQELLEEVA NLHEALGQLK MNRQSNLYKL RGDGSGEKDS KFNSQSGPPA STTSSSGELS 180 ASEKQDLQNK ITKLFSLLDE VDRKYRDYCQ QLQIVEAALD VVSGCGAARP YTALAHQTIS 240 RHFRCLRDAI NGQIQASRQS LGDQDDSSDR VLPRLRNMEK QLRQQRTIHQ LGVTRHSWRP 300 QRGLPEGSVS ILRAWLFEHF LNPYPKDSEK IILAKQTGLT RSQIANWFIN ARVRLWKPMI 360 EDMYKEEFGD PEGNCMSPSQ KHAPKVANNN SSSSEDKEKE CGRIDQSSDS NPDNFFNEME 420 VSRSPTQSHT DLPDQYRFGE PQSLSDFVV

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MATYYPTSSN HQRDVFPSSY LSSQQQLDSY QESSCPPADM MYQNQNSTDA SFLELLSGSN  60
DHGSQSNKVE QVDYLSFGLV GGANSTTKSG AINNGHCSIS DTYDVSYGIV GTILDSKYLK  120
PSQELLEEVA NLHEALGQLK MNRQSNLYKL RGDGSGEKDS KFNSQSGPPA STTSSSGELS  180
ASEKQDLQNK ITKLFSLLDE VDRKYRDYCQ QLQIVEAALD VVSGCGAARP YTALAHQTIS  240
RHFRCLRDAI NGQIQASRQS LGDQDDSSDR VLPRLRNMEK QLRQQRTIHQ LGVTRHSWRP  300
QRGLPEGSVS ILRAWLFEHF LNPYPKDSEK IILAKQTGLT RSQIANWFIN ARVRLWKPMI  360
EDMYKEEFGD PEGNCMSPSQ KHAPKVANNN SSSSEDKEKE CGRIDQSSDS NPDNFFNEME  420
VSRSPTQSHT DLPDQYRFGE PQSLSDFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	4e-99	TALE family protein