PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024970257.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

TALE

Protein Properties

Length: 507aa MW: 56924.9 Da PI: 5.3368

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024970257.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.9e-09	375	412	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe n+yp+ +e+ LAk++gLt +q+ +WF N R + XP_024970257.1 375 FEHflNPYPKDSEKIILAKQTGLTRSQIANWFINARVR 412 665559******************************88 PP
2	BELL	100.4	1.4e-32	241	312	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+q+lq+k++kL sll+eVd++Y+ y++qlq+v ++ ++v g+g+a+pYt+lA ++iSrhFrcL+dai +qi XP_024970257.1 241 EKQDLQNKITKLFSLLDEVDRKYRDYCQQLQIVEAALDVVSGCGAARPYTALAHQTISRHFRCLRDAINGQI 312 6899******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MATYYPTSSN HQRDVFPSSY LSSQQQLDSY QESSCPPADM MYQNQNSTDA SFLELLSGNM 60 QPNPQILSRV EDRNSLDDEH NLQYQELSLS LGMQIPSSAM DLPAFQYNYL NSHLPGSNDH 120 GSQSNKVEQV DYLSFGLVGG ANSTTKSGAI NNGHCSISDT YDVSYGIVGT ILDSKYLKPS 180 QELLEEVANL HEALGQLKMN RQSNLYKLRG DGSGEKDSKF NSQSGPPAST TSSSGELSAS 240 EKQDLQNKIT KLFSLLDEVD RKYRDYCQQL QIVEAALDVV SGCGAARPYT ALAHQTISRH 300 FRCLRDAING QIQASRQSLG DQDDSSDRVL PRLRNMEKQL RQQRTIHQLG VTRHSWRPQR 360 GLPEGSVSIL RAWLFEHFLN PYPKDSEKII LAKQTGLTRS QIANWFINAR VRLWKPMIED 420 MYKEEFGDPE GNCMSPSQKH APKVANNNSS SSEDKEKECG RIDQSSDSNP DNFFNEMEVS 480 RSPTQSHTDL PDQYRFGEPQ SLSDFVV

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MATYYPTSSN HQRDVFPSSY LSSQQQLDSY QESSCPPADM MYQNQNSTDA SFLELLSGNM  60
QPNPQILSRV EDRNSLDDEH NLQYQELSLS LGMQIPSSAM DLPAFQYNYL NSHLPGSNDH  120
GSQSNKVEQV DYLSFGLVGG ANSTTKSGAI NNGHCSISDT YDVSYGIVGT ILDSKYLKPS  180
QELLEEVANL HEALGQLKMN RQSNLYKLRG DGSGEKDSKF NSQSGPPAST TSSSGELSAS  240
EKQDLQNKIT KLFSLLDEVD RKYRDYCQQL QIVEAALDVV SGCGAARPYT ALAHQTISRH  300
FRCLRDAING QIQASRQSLG DQDDSSDRVL PRLRNMEKQL RQQRTIHQLG VTRHSWRPQR  360
GLPEGSVSIL RAWLFEHFLN PYPKDSEKII LAKQTGLTRS QIANWFINAR VRLWKPMIED  420
MYKEEFGDPE GNCMSPSQKH APKVANNNSS SSEDKEKECG RIDQSSDSNP DNFFNEMEVS  480
RSPTQSHTDL PDQYRFGEPQ SLSDFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	2e-98	TALE family protein