PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024970068.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family GATA
Protein Properties Length: 290aa    MW: 31997.5 Da    PI: 5.26
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024970068.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.43e-16206243136
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 
                     C++Cgt +  Tp++Rrgp g++tLCnaCGl+++ +g++
  XP_024970068.1 206 CAHCGTCSmdTPMMRRGPAGPRTLCNACGLFWANRGTM 243
                     **********************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MYGKSSMSEF GEIPPEEVPS HPGGVRNGVD SMDDRNVSYG LEDVDGGSDG ICDFEGIDGV  60
VYSDLAIMPR GDAGDQLTLS YCGQVYVFDN VTTDKVQKVF LHLGGCEFPV GQQGAESAYQ  120
NPRDLDYPGR CSDPRRAASL SRFRQKRKER CFEKKIRYNV RQEVARRMNR KKGQFVTSQN  180
SKESAPWNTG EAEGAEQDEI PVTTTCAHCG TCSMDTPMMR RGPAGPRTLC NACGLFWANR  240
GTMRDLSKKS NDQSSSLAEQ VYKCKDEYNG SNFGTTMPRC SNDAELGFGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.31e-64GATA family protein