PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024969595.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family FAR1
Protein Properties Length: 280aa    MW: 32526.2 Da    PI: 6.9897
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024969595.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR134.37.8e-111071494990
            FAR1  49 ekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     e++ r+++ +r+gC+a+lk++++k  g +e++++++eHnH+l+
  XP_024969595.1 107 ERRYRNTNLKRCGCNACLKIHLTKdGGCYEIYEFVEEHNHALF 149
                     56778999***************9899**************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MNIHTVKQSD DNKNEKAKSV CEYIRNSNSE SEENDQTIHI GFDDLTPPHT DFEYDIGETS  60
EGSKYFIPNV DDALKPKTNA QYATLNDAEK MYKDYADKAG FDVRPSERRY RNTNLKRCGC  120
NACLKIHLTK DGGCYEIYEF VEEHNHALFN DNDRRFSRKN RQMKYTDFKT VLNSSSYKVG  180
ARRAHRIQTA LNGGFEHTRV SEIDFKNFKR DAVACVGNKD ATMLINKLSN RRDVVLGYFF  240
EYKCNEHELI AIFWADEVAR INYKEFGDVI SFDGTFRTNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-15FAR1 family protein