PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024969595.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | FAR1 | ||||||||
Protein Properties | Length: 280aa MW: 32526.2 Da PI: 6.9897 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 34.3 | 7.8e-11 | 107 | 149 | 49 | 90 |
FAR1 49 ekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 e++ r+++ +r+gC+a+lk++++k g +e++++++eHnH+l+ XP_024969595.1 107 ERRYRNTNLKRCGCNACLKIHLTKdGGCYEIYEFVEEHNHALF 149 56778999***************9899**************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MNIHTVKQSD DNKNEKAKSV CEYIRNSNSE SEENDQTIHI GFDDLTPPHT DFEYDIGETS 60 EGSKYFIPNV DDALKPKTNA QYATLNDAEK MYKDYADKAG FDVRPSERRY RNTNLKRCGC 120 NACLKIHLTK DGGCYEIYEF VEEHNHALFN DNDRRFSRKN RQMKYTDFKT VLNSSSYKVG 180 ARRAHRIQTA LNGGFEHTRV SEIDFKNFKR DAVACVGNKD ATMLINKLSN RRDVVLGYFF 240 EYKCNEHELI AIFWADEVAR INYKEFGDVI SFDGTFRTNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-15 | FAR1 family protein |