PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024969327.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | SBP | ||||||||
Protein Properties | Length: 816aa MW: 89695.9 Da PI: 8.1455 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 129.8 | 1e-40 | 166 | 243 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dls ak+yhrrhkvCevhsk+ ++lv +++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+ XP_024969327.1 166 MCQVDNCKEDLSAAKDYHRRHKVCEVHSKSGKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 243 6**************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 816 aa Download sequence |
MEEVGTQLAP PLYMYNTIGA GRFSNGHPMA KKRSLPFQGT NFIQHQQQQQ YLQRLIPSLD 60 DSRNSWNPKN WEWDSSRLVA KPVDMMEISR EHEQQQQHHL PAIVSTNSDV SKKNPVGQRE 120 EDERLLLKLG GGLVPGEEPI TRPSKRVRSG SPGSGGGGGG GGNYPMCQVD NCKEDLSAAK 180 DYHRRHKVCE VHSKSGKALV GKQMQRFCQQ CSRFHPLSEF DEGKRSCRRR LAGHNRRRRK 240 TQPEDVASHL LLAGNGDKNG NGDMDIVNLL TVLARAQGNA EDMTRSSSPL PNKDQLIQIL 300 NKINSLPMPV DLVSKLPVSA SLKTIDQEKP SSEIQNKVNR KTSSSTMDLL GGLSGTSDAP 360 APNPPENSSQ KRNLAIESDK TNSSCRDQTM VLNPPNQPAA EMHSGGERSS TSFQSRGEDS 420 DCQVLDTPLN LQLQLFSSSP EDDSPPKLAS SRKYFSSDSS NPMEDRSPSS SPPVVQRLFP 480 TKSSRGRMKP ESMSTSGEVT ANVKASSVHG GTMSLELFGG PNAGTDNISI QSSPYRAGYT 540 SSSGSDQSPS SLNSDPQDRT GRILFKLFDK DPSHLPGSLR TQVYNWLSQS PSDMEGYIRP 600 GCVVLSIYLS MPLSSWDQLE GNFLQYINSL LQDSGTDFWG TGRFLAHTEK QIASHKDGKV 660 YLFKSLKAWS SPQLISVSPL AVVAGKETSL LLKGRNLRTP GTKIYCTHAD GCSLVEAKES 720 SQESTYEEIS TCSFTVCAPS VLGRCFIEIE NGFRGTSFPV IIADATLCKE LRLLEAEFGE 780 VLNESTFSRQ MPMGLAASHR CIWLLAHRIP MIWLML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G20980.1 | 0.0 | SBP family protein |