PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024969156.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 313aa    MW: 34223.1 Da    PI: 8.1483
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024969156.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.88e-1383134155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++++h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +v+YI +Lq
  XP_024969156.1  83 QKVSHMTVERNRRKQMNDHLSVLRSLMPRF---YVKRGDQASIIGGVVDYITELQ 134
                     6899*************************9...9*******************99 PP

Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MAGHCTFLPD FFHHQFGETT FLSPGADDVV FSVLEADHDH LEGISGGVNP VVSRKLDLSS  60
PKRKRQKLSV VEADGGPNSD GRQKVSHMTV ERNRRKQMND HLSVLRSLMP RFYVKRGDQA  120
SIIGGVVDYI TELQQILQTL EAKKQRKVYS EVLSPRLVSS PMTLSACPLS PRPSLPISPR  180
TPQPATPYRS CLPTSNSYLS PSISTSLDHS SPANSFITNS EGGNDLMANL KSAIVEVEVK  240
LVGGNLLLKT CSKRIPGQAT KVIRVLENLS LEVLQANISI VDEAMVNSFT TKIGVECQLS  300
AEELAQHIQS SFC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16168PKRKRQKL
28295RQKVSHMTVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.12e-47bHLH family protein