PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024969156.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 313aa MW: 34223.1 Da PI: 8.1483 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.8 | 8e-13 | 83 | 134 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++++h +Er+RR+++N+ ++ Lr+l+P + k+ + a+i +v+YI +Lq XP_024969156.1 83 QKVSHMTVERNRRKQMNDHLSVLRSLMPRF---YVKRGDQASIIGGVVDYITELQ 134 6899*************************9...9*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MAGHCTFLPD FFHHQFGETT FLSPGADDVV FSVLEADHDH LEGISGGVNP VVSRKLDLSS 60 PKRKRQKLSV VEADGGPNSD GRQKVSHMTV ERNRRKQMND HLSVLRSLMP RFYVKRGDQA 120 SIIGGVVDYI TELQQILQTL EAKKQRKVYS EVLSPRLVSS PMTLSACPLS PRPSLPISPR 180 TPQPATPYRS CLPTSNSYLS PSISTSLDHS SPANSFITNS EGGNDLMANL KSAIVEVEVK 240 LVGGNLLLKT CSKRIPGQAT KVIRVLENLS LEVLQANISI VDEAMVNSFT TKIGVECQLS 300 AEELAQHIQS SFC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 61 | 68 | PKRKRQKL |
2 | 82 | 95 | RQKVSHMTVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06120.1 | 2e-47 | bHLH family protein |