PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024969071.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 381aa MW: 41689.4 Da PI: 4.2422 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 61.5 | 2.7e-19 | 20 | 118 | 12 | 128 |
NAM 12 eelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktL 106 +e+v++ L + +g +l+l +v+++vd y++ P++Lp e+ wyf s kk +++g+W +tg+ e++s ++ +gl+ktL XP_024969071.1 20 DEVVCKSLVQFKSGCPLPL-NVLPDVDPYECMPSNLP------ENMWYFCSG-TKK---------DAEHGFWMSTGEACEIYS-TSVFTGLRKTL 96 5788888888888888999.89**************9......355665554.443.........3468**************.9999******* PP NAM 107 vfykgrapkgektdWvmheyrl 128 fy+g+ap+g+kt+W+m+ey+ XP_024969071.1 97 QFYEGQAPNGQKTNWMMQEYTT 118 ********************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 381 aa Download sequence |
MCPPASVTAP AIELDNYWTD EVVCKSLVQF KSGCPLPLNV LPDVDPYECM PSNLPENMWY 60 FCSGTKKDAE HGFWMSTGEA CEIYSTSVFT GLRKTLQFYE GQAPNGQKTN WMMQEYTTTE 120 KYSNKLDCRA LCRVFLADDK RSSRRLSESE LLEKRMDDGT GASAMANTSP DPPSAMADTS 180 PDPPSAMADT SPDPPSAMAD TSPDQPSGMG NNRSPDWPPE NIPDREYVLM GDYLELDDLA 240 ASISHSSSSA DSSCMTMTSE EFFDPVALMR ELGDDIVHQE VQDSSVKLNL SAPTKLKEVI 300 MDPTTLGFCD DGKECKPSIT QASKTDDTPQ NEPGDDRKES TSNGINTTAA AAASSSSEEK 360 KDRGGGTKKR KVMKYLCFLA F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18400.1 | 3e-16 | NAC family protein |