PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024969042.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 545aa MW: 61139.1 Da PI: 7.1458 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 53.6 | 4.2e-17 | 32 | 119 | 1 | 96 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffkv+ s+ l lp +fa + ++ +k +led+sg++W+vk+ + +g +++GW+ F a+gLk+gDf+vF+++ +s f vv XP_024969042.1 32 FFKVM--FGDEYSKVLFLPPRFAHSVrNM---VGKATRLEDPSGEKWKVKF--TMIDGFLAFEEGWNAFSTAHGLKVGDFLVFHYIMESHF--VV 117 55666..2233345699******777433...35689**************..********************************988888..66 PP EE CS B3 95 kv 96 + XP_024969042.1 118 LM 119 55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 545 aa Download sequence |
MVHVAEVCAE CTQNCLLMHK KDKNPSPVAT TFFKVMFGDE YSKVLFLPPR FAHSVRNMVG 60 KATRLEDPSG EKWKVKFTMI DGFLAFEEGW NAFSTAHGLK VGDFLVFHYI MESHFVVLMY 120 GQSGCPEIQH FGFNRHQMED TRKKQSLITD NTNSKPSNVN TTDHHISCES SQSEHSDNEH 180 PEIRPSVGTQ HKDERIKKKG TAVQLPPSVN AKNTCNRLLA SSSRPGPSVS GKELVGDENP 240 DNMVSETPPT VKQFCLVDND IEHVEDEHRS NLINRFHLDR LPTKKRAIEN LENLSERLSS 300 RDCLHDLSIP EINPLESDDV RKNNVAVGGC GNATQINKSG KTLETRSEES RENPKKSTIM 360 PSEATCNNSI KKRLRSSNLP IARPKKAKKE PAGASETDTL GSRLHDAVRP SPSTEIFPKS 420 IATKKELISD EKDNDRFVKP EPVDYDEALP PGPTNSLFSA VMSSYQYLEL PEWVKLKKVI 480 LLRNGGDLWP VLYQNQLGLK ALTQSWQVFA RERGIQPGDN CEFVLESEPN ADLPCSVFRV 540 HVTAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18960.1 | 6e-13 | B3 family protein |