PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024968646.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family B3
Protein Properties Length: 347aa    MW: 39906.9 Da    PI: 9.1254
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024968646.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.91.6e-1797187199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f k ++ps+vl s +l+lpkkf+  h   +e ++t+tl de+g++++ ++   k +  + l++GW++F  a++L +gD++ F+l++    +l v 
  XP_024968646.1  97 FAKCMLPSNVLYSFWLILPKKFCVMHL--PEHDTTVTLVDETGKEFKTNY--LKVR--HGLSAGWRGFSIAQKLLQGDILFFHLVEPC--KLQVN 183
                     889********************9994..34678****************..5554..55***********************98633..35888 PP

                     EE-S CS
              B3  96 vfrk 99 
                     ++r+
  XP_024968646.1 184 IVRR 187
                     7775 PP

Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MDFYKQTLVE QDAEMKQNLA SDNNNSKKKR KRKRTPKEPW EPKSKDKQIM SDKPKKCPGK  60
GKRTRVCDIY NDAEDQYMCL ERAAFLLERL DAESPKFAKC MLPSNVLYSF WLILPKKFCV  120
MHLPEHDTTV TLVDETGKEF KTNYLKVRHG LSAGWRGFSI AQKLLQGDIL FFHLVEPCKL  180
QVNIVRRYGL ETIEAAVCLM EMHPRVKKTR TSNYFDKAGE PKKEKLKHKE AKKEDEGKLK  240
NQTPPMLIQT KKGKRTRRSP KKFIARLSLD FCERNVEEDG ERVSCVDQCE NSSDGLSSEV  300
VQGSTLEMTN QSQPDEVGCY ALNLACHEGI NCHSTAERIY HSSTVTT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12733KKKRKRK
22755KKKRKRKRTPKEPWEPKSKDKQIMSDKPK
32834KKKRKRK
42856KKKRKRKRTPKEPWEPKSKDKQIMSDKPK
52833KKRKRK
62957KKKRKRKRTPKEPWEPKSKDKQIMSDKPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.17e-28B3 family protein