PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024968646.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 347aa MW: 39906.9 Da PI: 9.1254 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 54.9 | 1.6e-17 | 97 | 187 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f k ++ps+vl s +l+lpkkf+ h +e ++t+tl de+g++++ ++ k + + l++GW++F a++L +gD++ F+l++ +l v XP_024968646.1 97 FAKCMLPSNVLYSFWLILPKKFCVMHL--PEHDTTVTLVDETGKEFKTNY--LKVR--HGLSAGWRGFSIAQKLLQGDILFFHLVEPC--KLQVN 183 889********************9994..34678****************..5554..55***********************98633..35888 PP EE-S CS B3 96 vfrk 99 ++r+ XP_024968646.1 184 IVRR 187 7775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence |
MDFYKQTLVE QDAEMKQNLA SDNNNSKKKR KRKRTPKEPW EPKSKDKQIM SDKPKKCPGK 60 GKRTRVCDIY NDAEDQYMCL ERAAFLLERL DAESPKFAKC MLPSNVLYSF WLILPKKFCV 120 MHLPEHDTTV TLVDETGKEF KTNYLKVRHG LSAGWRGFSI AQKLLQGDIL FFHLVEPCKL 180 QVNIVRRYGL ETIEAAVCLM EMHPRVKKTR TSNYFDKAGE PKKEKLKHKE AKKEDEGKLK 240 NQTPPMLIQT KKGKRTRRSP KKFIARLSLD FCERNVEEDG ERVSCVDQCE NSSDGLSSEV 300 VQGSTLEMTN QSQPDEVGCY ALNLACHEGI NCHSTAERIY HSSTVTT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 27 | 33 | KKKRKRK |
2 | 27 | 55 | KKKRKRKRTPKEPWEPKSKDKQIMSDKPK |
3 | 28 | 34 | KKKRKRK |
4 | 28 | 56 | KKKRKRKRTPKEPWEPKSKDKQIMSDKPK |
5 | 28 | 33 | KKRKRK |
6 | 29 | 57 | KKKRKRKRTPKEPWEPKSKDKQIMSDKPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19184.1 | 7e-28 | B3 family protein |