PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024968289.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 232aa MW: 27035 Da PI: 10.3817 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 81.7 | 4.8e-26 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskR ng+lKKA+EL +LCdaev ++ifs+tg+l+ey+s XP_024968289.1 10 RIENPTSRQVTFSKRSNGLLKKAKELAILCDAEVGLVIFSNTGRLHEYAS 59 8***********************************************86 PP | |||||||
2 | K-box | 80.6 | 3.7e-27 | 82 | 170 | 10 | 98 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +a+ + +q e+a+++++++ Lq+++R+l Ge+L+ L++k+Lq+Le+qLe+slk++R K+++++e+i+el +k + + +enk+L+kk+ XP_024968289.1 82 PTADVKFWQGEAARMRQQLQYLQQSHRQLFGEELSGLNVKDLQKLENQLETSLKNVRINKEHIFTEEIKELHRKGNHIVQENKELQKKV 170 567789*********************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MGRGKIPIRR IENPTSRQVT FSKRSNGLLK KAKELAILCD AEVGLVIFSN TGRLHEYASS 60 SMTKVTERYN KVKEECRQLV NPTADVKFWQ GEAARMRQQL QYLQQSHRQL FGEELSGLNV 120 KDLQKLENQL ETSLKNVRIN KEHIFTEEIK ELHRKGNHIV QENKELQKKV TLLHQEKSDL 180 QKKIYRLWTM DEANRNSNAS YSLRINDLNA LQLSQPQPQK KDIPADTMKL RL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.1 | 4e-73 | MIKC_MADS family protein |