PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024967908.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | G2-like | ||||||||
Protein Properties | Length: 332aa MW: 37121.8 Da PI: 5.5026 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 98.3 | 5.2e-31 | 208 | 262 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W++eLH+rFv+a++qLGGs+ AtPk+i+elm+v+gLt+++vkSHLQkYRl+ XP_024967908.1 208 KQRRCWSTELHRRFVNALQQLGGSH-ATPKQIRELMQVDGLTNDEVKSHLQKYRLH 262 79*******************9988.****************************97 PP | |||||||
2 | Myb_DNA-binding | 46.2 | 1e-14 | 210 | 260 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+te++ ++v+a +qlGg t+k I + m+ g+t ++ks++qky+ XP_024967908.1 210 RRCWSTELHRRFVNALQQLGGShaTPKQIRELMQvDGLTNDEVKSHLQKYR 260 568*****************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MGSLNPSPEL TLDLKPSFIP KTISQFLGGM SRIGSVTEKV LQVDDFVDRL ETETRKIEAF 60 ERELPLCMLL INDAIVALKE VSMVLKKSSN AEPVLEEFIP LKNSCDDDAK VESIIKKDSG 120 DKKNWLSSTQ LWNTNENIIQ IPNATIKKRA EEEDCGKAFF FPEIKNPMRE NGLLTEINGD 180 CRLTQNVQSN IQTSGTAGLP PHQQTSRKQR RCWSTELHRR FVNALQQLGG SHATPKQIRE 240 LMQVDGLTND EVKSHLQKYR LHTRRFPSSN TNQSGVVLGG GLWMPPQDQY VGSSKCSNSQ 300 SGSPDGPLPN GGNTMDDEED EKSENYCWTG NL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03500.1 | 5e-53 | G2-like family protein |