PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024966760.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 263aa MW: 30495.3 Da PI: 8.853 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.1 | 3.1e-16 | 10 | 57 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l+ +v+++G ++W+ Ia+ g++Rt+k+c++rw +yl XP_024966760.1 10 KGPWTEHEDLQLILYVRMFGDRRWDFIANVSGLKRTGKSCRLRWVNYL 57 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.7 | 8.5e-16 | 63 | 108 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ + E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++ XP_024966760.1 63 RGKMAPHEERLVLELHSKFGNR-WSRIARKLP-GRTDNEIKNYWRTHM 108 788899****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 263 aa Download sequence |
MGQDDETMRK GPWTEHEDLQ LILYVRMFGD RRWDFIANVS GLKRTGKSCR LRWVNYLHPG 60 LKRGKMAPHE ERLVLELHSK FGNRWSRIAR KLPGRTDNEI KNYWRTHMRK KAQEKKKTTS 120 RSQSPSLSYC SSSSSICTNN PVVDSMPMIE TKERSFYDTG GVEMFTIMKG KNNSNNNSFK 180 TPTTRFSEST DGQEGHYSMD EIWKDIDLLD DSIKPVFDPY SELTASLTWD SCLSTSWTMD 240 GQEEFGKSMF SLTSKEFSSR LTD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46130.1 | 5e-78 | MYB family protein |