PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024966659.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 375aa MW: 41832.1 Da PI: 6.4289 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31 | 4.7e-10 | 195 | 242 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_024966659.1 195 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 242 8**************************....999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence |
MNGASPECHN NIPGNTTGGG GGEVSVFERQ QARMKWQQQQ QMLFNGNDHQ VPNMLSAMQP 60 SGLIGNFAIK PDPGIENGWP DFSYGDQLGY GSGFDHMNQN THSRMTSFRP PLMADQTILQ 120 KNSSSASLSP KKRKAHENQK LKVVSEENGV KEKELKGCSD GDSTETSSKE KPKLTEAKKQ 180 EYIHVRARRG QATDSHSLAE RVRREKISER MKYLQDLVPG CNKITGKAGM LDEIINYVQS 240 LQRQVEFLSM KLATVHPRLD FDIDSLITTE MFVSGEVSAV GYSSEMANST YLQLNSLLEM 300 GTNPIDMVLR SIGSPVSIPE TFVVSSCFNI QPTVTWDADL QNLYRMELQH DTSTIPFQTQ 360 KFTGSYEGSN LKMEM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34530.1 | 4e-60 | bHLH family protein |