PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024965946.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 112aa MW: 12680.5 Da PI: 8.501 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.8 | 0.00046 | 14 | 52 | 11 | 54 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 rR +++ +++ L++l+ + +K + a++L++A Ik L XP_024965946.1 14 RRSQKLADKITALQKLVSPY-----GKTDTASVLQEAHISIKLL 52 899***************99.....9***********9888866 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 112 aa Download sequence |
MQEIECVRER VPMRRSQKLA DKITALQKLV SPYGKTDTAS VLQEAHISIK LLHDQIQNLL 60 QKTQTSTIND GSLQFQETET GLHNRGLCLV PISTPQINSL CEGKQNFMPR SY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05710.3 | 7e-18 | bHLH family protein |