PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024965336.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | FAR1 | ||||||||
Protein Properties | Length: 691aa MW: 79902.8 Da PI: 6.383 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 75.7 | 9.2e-24 | 70 | 161 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFsvrk++s++s++ g +++r+fvC+++g+++++kk+++++ r r++ r+gC+akl ++ke +w+++++++ HnHel XP_024965336.1 70 EYYCNFARKNGFSVRKARSTESQNLG-VYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIvdgVTQWYISQFSNIHNHELL 161 69********************8888.******************************************998766789*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 691 aa Download sequence |
MATKPLNNIW IRRQQCPCGD WKCYIKYEGD DQTNGGSELV KSDGATPSLS DVIFTPYVGQ 60 IFKSDDEAFE YYCNFARKNG FSVRKARSTE SQNLGVYRRD FVCYRSGFNQ PRKKANVEHP 120 RDRKSVRCGC DAKLYLTKEI VDGVTQWYIS QFSNIHNHEL LEDDQVRLLP AYRKIQESDQ 180 ERILLLTKAG FPVNRIVKVL ELEKGVQPGQ LPFLEKDVRN FVRTCKKTVQ ENDALLTEKR 240 EIDMLALLES CRTTAQRDDG FVYNYTTDEN GKVENVSWAY GVSIRAFSVF GDVVTFETTY 300 RSITYNMLLG VWFGIDNQGK AFLLGCVLLQ DETSQSFSWA LQAFIQFLRG NHPQTIVTDI 360 DSGLRDAIAT ELPNTKHVVC IWHVLSKLSS WFSLPLGLQY SEFKSEFELL CHLENIEDFE 420 NQWNHLVARF GIGSDKHVVL LFSYRASWPV AYIRGYFLAR TMTVDYMKSV DKFMKNILSP 480 HSSFKNFFEQ VSVAANVVFQ NKERLSYLPI KTCLPLEEHA RSILSPYAFN ALQQELVLCM 540 QYATTDMANG SYLVRHYNKL EGECLVIWIP DNEQVHCSCK EYEHSGILCR HSLRVLVLKN 600 YFQIPEKYYP LRWRLDSSLV LSDDHITQDS SDEFSETFHS LTSILYSESL ISKERFSYVH 660 RELTQILDIV RNMHVFDETA LEVAPNNVSE L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 0.0 | FAR1 family protein |