PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024965336.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family FAR1
Protein Properties Length: 691aa    MW: 79902.8 Da    PI: 6.383
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024965336.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR175.79.2e-2470161190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 
                     ++Y+++A++ GFsvrk++s++s++ g +++r+fvC+++g+++++kk+++++ r r++ r+gC+akl ++ke      +w+++++++ HnHel 
  XP_024965336.1  70 EYYCNFARKNGFSVRKARSTESQNLG-VYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIvdgVTQWYISQFSNIHNHELL 161
                     69********************8888.******************************************998766789*************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 691 aa     Download sequence    
MATKPLNNIW IRRQQCPCGD WKCYIKYEGD DQTNGGSELV KSDGATPSLS DVIFTPYVGQ  60
IFKSDDEAFE YYCNFARKNG FSVRKARSTE SQNLGVYRRD FVCYRSGFNQ PRKKANVEHP  120
RDRKSVRCGC DAKLYLTKEI VDGVTQWYIS QFSNIHNHEL LEDDQVRLLP AYRKIQESDQ  180
ERILLLTKAG FPVNRIVKVL ELEKGVQPGQ LPFLEKDVRN FVRTCKKTVQ ENDALLTEKR  240
EIDMLALLES CRTTAQRDDG FVYNYTTDEN GKVENVSWAY GVSIRAFSVF GDVVTFETTY  300
RSITYNMLLG VWFGIDNQGK AFLLGCVLLQ DETSQSFSWA LQAFIQFLRG NHPQTIVTDI  360
DSGLRDAIAT ELPNTKHVVC IWHVLSKLSS WFSLPLGLQY SEFKSEFELL CHLENIEDFE  420
NQWNHLVARF GIGSDKHVVL LFSYRASWPV AYIRGYFLAR TMTVDYMKSV DKFMKNILSP  480
HSSFKNFFEQ VSVAANVVFQ NKERLSYLPI KTCLPLEEHA RSILSPYAFN ALQQELVLCM  540
QYATTDMANG SYLVRHYNKL EGECLVIWIP DNEQVHCSCK EYEHSGILCR HSLRVLVLKN  600
YFQIPEKYYP LRWRLDSSLV LSDDHITQDS SDEFSETFHS LTSILYSESL ISKERFSYVH  660
RELTQILDIV RNMHVFDETA LEVAPNNVSE L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.10.0FAR1 family protein