PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024965279.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family GeBP
Protein Properties Length: 328aa    MW: 36645.9 Da    PI: 3.8769
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024965279.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57336.11.8e-111132051098
          DUF573  10 eDeivlLqGlidfkaktgkspsd..didafyef.vkksisfkvsksqlveKirrLKkKfkkkvkkaksgkep.sfskehdqkifelskkiWgs 98 
                     e ei lL  +idf +k+g  p+d  d+d+fy++ ++k+  +  ++ +l  Ki +L  Kf k+ +++ +g+++ +  ++ d +i++ls ++Wg+
  XP_024965279.1 113 EEEIDLLNDIIDFYNKKGRYPYDskDVDEFYKKwIEKRTGVYRNEMDLNIKINELHVKFVKNLERRWNGDDIkDWMNAVDVEIYQLSYRVWGK 205
                     679****************888777******863888999999*********************9777777516899**************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MDDSSKSQHT NPSSSYPPGF ANGSTKSPSP SIGNNPLPPP TSPQGGGGGA TATTSSSKRK  60
KPSTDHDEHE ELQDDADSTT RMKCHQTNSS TAGDEVAATT TTGGGCPRRR RIEEEIDLLN  120
DIIDFYNKKG RYPYDSKDVD EFYKKWIEKR TGVYRNEMDL NIKINELHVK FVKNLERRWN  180
GDDIKDWMNA VDVEIYQLSY RVWGKEDDDQ ETEDLKASAE QETDDDDQET EDSKDLEDSG  240
EQETDDDQET DDDQETEDSS TDQETDDDHD GSGSEDSTEE ETDDETDDSE SKDSDDSSSN  300
DSKDSSFDSK DSEDSSFDLK DSEDSSSN