PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024965116.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family GeBP
Protein Properties Length: 315aa    MW: 34922 Da    PI: 4.1781
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024965116.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573331.7e-101222131197
          DUF573  11 DeivlLqGlidfkaktgkspsddidafyefvkksis....fkvsksqlveKirrLKkKfkkkvkkaksgkep.sfskehdqkifelskkiWg 97 
                      ei+lL  ++d+ +k+g  p d+ +++++f k+ ++    + +++  l +K+  L  +f ++  ++ +g+e+ +   + d +i+els +iWg
  XP_024965116.1 122 EEIALLNDILDYCKKKGRCPADHFKHLHKFYKNWVErrtrVYMNEIVLNNKMEDLHVRFVQNLGRTWDGEEIeEWMDPIDVEIYELSYSIWG 213
                     69****************8877777777666665541111667888899****************8887776267899*************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MDDSSKPQHT NPSSSNPPGF AIGSTASSSP PSTGNNPPPP QPPPPPPSSP QGVATATTSS  60
SKRKKPSTDD QGEHEEFQDD IDAGGITRTK CHQTNKSTAG DDVAAAAAMN TASGGSPRRR  120
REEIALLNDI LDYCKKKGRC PADHFKHLHK FYKNWVERRT RVYMNEIVLN NKMEDLHVRF  180
VQNLGRTWDG EEIEEWMDPI DVEIYELSYS IWGEEDDDIG FHDDGGMNDS KDEEQTGDPK  240
DSKDEKTKHD LEDSSEQETD DDNGTKDSTE QETDDDNGTK DSTDDGHDET EDSKALKAST  300
EQETDDDQET EDSKT